MIR

Contents:

  • Quick Start
  • Brain registration (affine + deformable)
  • IXI benchmarking quick start
  • Brain template example
  • Models
  • API Reference
MIR
  • Overview: module code

All modules for which code is available

  • MIR.accuracy_measures.acc_measures
  • MIR.accuracy_measures.digital_diffeomorphism
  • MIR.deformation_regularizer.GlobalRegularizers
  • MIR.deformation_regularizer.KL_divergence
  • MIR.deformation_regularizer.LocalRegularizers
  • MIR.image_similarity.CompositeRecon
  • MIR.image_similarity.Correlation_Ratio
  • MIR.image_similarity.Dice
  • MIR.image_similarity.MIND_SSC
  • MIR.image_similarity.Mutual_Information
  • MIR.image_similarity.NCC
  • MIR.image_similarity.PCC
  • MIR.image_similarity.SSIM
  • MIR.image_similarity.Segmentation_Overlap
  • MIR.models.Deformable_Swin_Transformer
  • MIR.models.Deformable_Swin_Transformer_v2
  • MIR.models.HyperMorph
  • MIR.models.HyperTransMorph
  • MIR.models.HyperVFA
  • MIR.models.MultiMorph
  • MIR.models.Segmentation_Heads
  • MIR.models.Selfsupervised_Learning_Heads
  • MIR.models.Swin_Transformer
  • MIR.models.Synthesis_Heads
  • MIR.models.TransMorph
  • MIR.models.TransVFA
  • MIR.models.VFA
  • MIR.models.VoxelMorph
  • MIR.models.affine_reg
  • MIR.models.atlas_builder
  • MIR.models.configs_TransMorph
  • MIR.models.configs_VFA
  • MIR.models.configs_VoxelMorph
  • MIR.models.convexAdam.configs_ConvexAdam_MIND
  • MIR.models.convexAdam.convex_adam_MIND
  • MIR.models.convexAdam.convex_adam_MIND_SPR
  • MIR.models.convexAdam.convex_adam_VFA
  • MIR.models.convexAdam.convex_adam_features
  • MIR.models.convexAdam.convex_adam_nnUNet
  • MIR.models.registration_utils
  • MIR.utils.other_utils
  • MIR.utils.registration_utils
  • MIR.utils.segmentation_utils
  • MIR.utils.training_utils
  • MIR.utils.visualization_utils

© Copyright 2026 Junyu Chen.

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